Fourier domain mode-locked (FDML) lasers are frequency-swept lasers that operate in the near-infrared region and allow for the attainment of a large sweep-bandwidth, high sweep-rate, and a narrow instantaneous linewidth, all of which are usually quite desirable characteristics for a frequency-swept laser. They are used in various sensing and imaging applications but are most commonly noted for their practical use in optical coherence tomography (OCT). An FDML laser consists of three fundamental components, which are the semiconductor optical amplifier (SOA), optical fiber, and the wavelength-swept optical bandpass filter. Due to the complicated nonlinear dynamics of FDML lasers that stems from the coaction of these three components, often the output signal of an FDML laser is corrupted by frequent power-dips of varying depth and duration. The frequent recurrence of these dips in the FDML laser signal pattern lowers the quality of imaging and detection. This study examines the role of the linewidth enhancement factor (LWEF) of an SOA in reducing both the strength and the number of power-dips throughout the FDML laser operation. The results are obtained using numerical computations that are in agreement with experimental data. The study aims to show that using SOAs with low LWEFs, the number of power-dips can be reduced for a better detection and imaging quality.