The Arabidopsis (Arabidopsis thaliana) fatty acid biosynthesis1 (fab1) mutant grows as well as wild type at 22°C, but after transfer to 2°C fab1 plants cannot maintain photosynthetic function and die after 5 to 7 weeks at 2°C. A fab1 suppressor line, S7, was isolated in a screen that identified mutants that remained alive after 16 weeks at 2°C and were able to flower and produce seed after return to 22°C. Relative to wild type, S7 plants had reduced levels of 16:3 fatty acid in leaf galactolipids, indicating reduced synthesis of chloroplast glycerolipids by the prokaryotic pathway of lipid metabolism. The suppressor mutation was identified, by map-based and candidate-gene approaches, as a hypomorphic allele of lysophosphatidic acid acyltransferase1 (lpat1), lpat1-3. LPAT1 encodes the enzyme that catalyzes the second reaction in the prokaryotic pathway. Several lines of evidence indicate that damage and death of fab1 plants at 2°C may be a result of the increased proportion of phosphatidylglycerol (PG) in fab1 that are high-melting-point molecular species (containing only 16:0, 18:0, and 16:1,D3-trans fatty acids). Consistent with this proposal, the lpat1-3 mutation strongly affects the fatty acid composition of PG. The proportion of highmelting-point molecular species in PG is reduced from 48.2% in fab1 to 10.7% in fab1 lpat1-3 (S7), a value close to the 7.6% found in wild type.There are two distinct pathways in higher plants for the synthesis of membrane glycerolipids. Both pathways are initiated by the synthesis of 16:0-acyl carrier protein (16:0-ACP) from acetyl-CoA by plastid acetylCoA carboxylase and enzymes of the fatty acid synthase. 16:0-ACP may be elongated by one additional cycle of the fatty acid synthase and then desaturated by the stromal 18:0-ACP desaturase (Lindqvist et al., 1996), so that 16:0-ACP and 18:1-ACP are the primary products of plastid fatty acid synthesis (Ohlrogge and Browse, 1995). The prokaryotic pathway located in the plastid envelope begins with the synthesis of 18:1-lysophosphatidic acid by acyl-ACP:glycerol-3-P acyltransferase. Then 16:0-ACP:lysophosphatidic acid acyltransferase (LPAT) completes the synthesis of phosphatidic acid (PA) that is a key intermediate in glycerolipid synthesis. The PA in the prokaryotic pathway is used for the synthesis of phosphatidylglycerol (PG) and, in some plants, as a precursor via diacylglycerol for the synthesis of monogalactosyldiacylglycerol (MGD), digalactosyldiacylglycerol (DGD), and sulfoquinovosyldiacylglycerol (SQD), the four major glycerolipids of the photosynthetic thylakoid membranes. The alternative eukaryotic pathway begins with the hydrolysis of acyl-ACPs and the synthesis of 16:0-CoA and 18:1-CoA in the plastid envelope for export to the endoplasmic reticulum, where they are used for the synthesis of phosphatidylcholine (PC) and other phospholipids characteristic of the various extrachloroplast membranes of the cell. In addition, the diacylglycerol moiety of PC is returned to the chloroplast envelope-possibly in the form of PA (Be...