Serratia marcescens generates secondary metabolites and secreted enzymes, and it causes hospital infections and communityacquired ocular infections. Previous studies identified cyclic AMP (cAMP) receptor protein (CRP) as an indirect inhibitor of antimicrobial secondary metabolites. Here, we identified a putative two-component regulator that suppressed crp mutant phenotypes. Evidence supports that the putative response regulator eepR was directly transcriptionally inhibited by cAMP-CRP. EepR and the putative sensor kinase EepS were necessary for the biosynthesis of secondary metabolites, including prodigiosin-and serratamolide-dependent phenotypes, swarming motility, and hemolysis. Recombinant EepR bound to the prodigiosin and serratamolide promoters in vitro. Together, these data introduce a novel regulator of secondary metabolites that directly connects the broadly conserved metabolism regulator CRP with biosynthetic genes that may contribute to competition with other microbes.
IMPORTANCEThis study identifies a new transcription factor that is directly controlled by a broadly conserved transcription factor, CRP. CRP is well studied in its role to help bacteria respond to the amount of nutrients in their environment. The new transcription factor EepR is essential for the bacterium Serratia marcescens to produce two biologically active compounds, prodigiosin and serratamolide. These two compounds are antimicrobial and may allow S. marcescens to compete for limited nutrients with other microorganisms. Results from this study tie together the CRP environmental nutrient sensor with a new regulator of antimicrobial compounds. Beyond microbial ecology, prodigiosin and serratamolide have therapeutic potential; therefore, understanding their regulation is important for both applied and basic science.
In order for organisms to survive and prosper, they must be able to sense their environment and effectively compete with other organisms. To respond to these environmental changes, bacteria have developed elaborate transcriptional regulatory systems that enable fine-tuning of factors that allow for their adaptation and proliferation. One of the most studied signaling systems involved in adaptation to the nutritive status of the environment is the cyclic AMP (cAMP)-associated catabolite repression system (1-4). The second messenger cAMP has been classified as an alarmone that induces positive regulation of alternative carbon transport systems in times of carbon/fuel deprivation (5). In addition to catabolite repression control, this system also can positively regulate flagellum production in unfavorable conditions (6) and activate attachment factors in nutrient-rich conditions (7).Evidence suggests that cAMP-cAMP receptor protein (CRP) can directly bind to and promote expression of secondary metabolite genes involved in antibiotic production in Streptomyces coelicolor (2). A positive or negative role for cAMP has been suggested for control of antimicrobial production in other organisms, including fungi, although dire...