In one of our recent studies, we have shown that a large defocusing distance in the transport of intensity equation (TIE) is required to retrieve the phase information in low-light conditions (OSA Continuum 3 (2020) 236). It has been found that image misalignment issues come into the picture due to translation of the camera for large distances, which creates artifacts in phase recovery. The issue of misalignment can be overcome if, instead of the object, we use the digital hologram of the object for the required defocused intensities and then apply the TIE. In this paper, we demonstrate low-light phase imaging by combining digital holography with the TIE. We reconstruct the required multiple intensity distributions from the captured in-line digital hologram. To implement the low-level light illumination, a variable neutral density filter has been used while recording the in-line digital hologram. Simulation and experimental results with different objects (United States air-force chart and glue drop) are presented. To simulate the low-light conditions, a Poisson distribution based photon-counting imaging technique has been applied.