Herbicide resistance is an exceptional marker to quantify gene flow. Quantification of pollen-, seed-, and vegetative propagule-mediated gene flow provides key weed biology information. Pollen-mediated gene flow influences the genetic variance within a population, the frequency of multiple or polygenic herbicide resistance, and the evolutionary dynamics of a species. Seed-mediated gene flow predominates in self-pollinating species. Gene flow quantification may enable the estimation of herbicide resistance epicenter, the comparison of the relative importance of gene flow pathways, and prediction of future distribution of resistance traits. Gene flow studies using herbicide resistance also can provide insight into the rates and importance of hybridization.Approaches to studying gene flow must consider the biology, breeding system, and dispersal mechanism(s) of the species. We recommend a hypothesis-driven, tiered approach, adopted from an environmental risk assessment for genetically modified crops (Garcia-Alonso et al. 2006;Raybould 2006;Raybould and Cooper 2005;Wolt et al. 2010). General approaches to gene flow studies are outlined, primarily utilizing herbicide resistance as a marker system, but morphological and molecular markers may be required to assist with rapid identification or to identify/confirm hybrids.A well-constructed quantification of gene flow first organizes existing information on the nature of the resistance trait, the biology of the species (weed or crop), and the mode of inheritance (tier 0) (Figure 1). Data are then systematically acquired on frequency and distance of gene flow, moving from small-scale, controlled environments (tier 1) to more variable environments, at a larger scale and sample size (tiers 2 and 3). Information gathered in early tiers guides hypothesis development and experimental design for studies in subsequent tiers. The aim of this chapter is to guide the decision-making process and provide examples of appropriate experimental designs and analysis, recognizing that these may need to be modified on the basis of the species and ecological system. This chapter first outlines information required for problem identification (tier 0) and then describes the tiered approach for pollen-, seed-, and vegetative propagule-mediated gene flow. Models of pollen-and seed-mediated gene flow have been reviewed elsewhere (Beckie and Hall 2008;Nathan et al. 2011) and are not addressed here.Approaches to Study Gene Flow. Tier 0 Problem Identification. Problem identification is the first step in developing the hypothesis and designing experiments for gene flow quantification. Assemble available information, including reproductive biology, pollen vectors, related species with the potential to hybridize, the nature of inheritance of herbicide resistance, and pre-existing data on gene flow within (intra) and between (inter) species or genera. Information required for seed-or vegetative propagule-mediated gene flow includes dispersal mechanisms and vectors for dispersal. Next, identify informati...