“…The original protocol was modified to amplify the polymerase ( pol ) gene fragment spanning the protease (PR) and up to 230 amino acids in the reverse transcriptase gene (RT). Generation of PCR products and sequencing was done as described previously [ 24 ]. Briefly, the PCR products were cleaned using the High Pure PCR Product Purification Kit (Roche Diagnostics GmbH, Mannheim, Germany).…”