“…Hyperdynamics is another method involving AC MD simulation by lowering energy barriers, while performing the simulation of a nano/atomic system. MD simulations have also been widely used in the design of pharmaceuticals, materials used in bioinformatics, and molecular design of advanced materials (Řezanka, Stibor, Azizoglu, Turgut, & Pirinccioglu, 2016;Verdura et al, 2018;Zhuang, Zhang, & Liu, 2014). For example, Gupta, Nunes, Vyas, and Jonnalagadda (2011) evaluated solubility parameters and miscibility of pharmaceutical compounds using MD simulation, whereas Bermudez, Mortier, Rakers, Sydow, and Wolber (2016) used MD simulation to probe the conformational state of proteins.…”