The purpose of this study was to justify of the formation technique of representation of modeling methodology at computer science lessons. The necessity of studying computer modeling is that the current trends of strengthening of general education and worldview functions of computer science define the necessity of additional research of the problems relating to study of computer modeling bases within the basic course of computer science. Such necessity is caused by that "Mathematics and Computer Science" education range is a backbone line of the course. Consideration of modeling issues within computer science course is the basis of cogitative operations development called in pedagogies as methods of mental actions or intellectual abilities. But at schools and in pedagogical higher education institutions of Republic of Kazakhstan this section of computer science course is not considered properly. The issues related to a formation technique of basic concepts of modeling, and also usage of applied software environments for development and research of models except an Excel editor are not developed. Practically there are no techniques creating a broad view on concept of model, there is no methodically acceptable models' typology. The research results indicate that when disclosing the material on themes about modeling stages the process is should be considered as cyclic, there is need of interpretation of models' relevance concept, "undelivered", "vital" tasks are should be considered, which fully reflect intersubject links.