Whole-genomic expression patterns were examined in Shewanella oneidensis cells exposed to elevated sodium chloride. Genes involved in Na ؉ extrusion and glutamate biosynthesis were significantly up-regulated, and the majority of chemotaxis/motility-related genes were significantly down-regulated. The data also suggested an important role for metabolic adjustment in salt stress adaptation in S. oneidensis.Shewanella species inhabit diverse environments, including spoiled food (11) and infected animals (35), deep-sea and freshwater lake sediments (8,45,54), and oilfield waste sites (44). Shewanella oneidensis MR-1, a facultative, gram-negative bacterium, was isolated from sediments of Lake Oneida in New York (32). The bacterium can anaerobically respire numerous organic compounds, including fumarate and dimethyl sulfoxide (28), as well as reduce metals such as Fe(III), Mn(IV), Cr(VI), and U(VI) (22,29,32). Because of the respiratory versatility, which may be exploited for immobilization of environmental pollutants (i.e., chromium and uranium) in soil and groundwater, the metal-reducing capabilities of Shewanella spp. have been intensively investigated (6,14,15,26,30,33,39).The MR-1 genome was recently sequenced (16), and some fundamental similarities and disparities between MR-1 and other sequenced bacteria have been observed (16). To experimentally probe the genomic response of S. oneidensis to various physiologically relevant environmental stresses, a wholegenome cDNA microarray for MR-1 was constructed in this laboratory. In this study, we used this cDNA microarray to profile transcriptional responses of MR-1 to elevated sodium salt stress. The results indicated that the expression of the genes involved in osmolyte protection, cation efflux/influx, motility, and electron transport were significantly altered.MR-1 requires a relatively high salt concentration for optimal growth. Many Shewanella species have been isolated from marine environments, whereas some, like MR-1, have been isolated from freshwater environments (36, 39). To understand how various salt concentrations impact the growth of S. oneidensis, MR-1 cells were cultivated in triplicates in MR2A medium (12) containing different amounts of NaCl (ranging in concentration from 0 to 0.6 M) at 30°C under aerobic conditions (shake flasks, 120 rpm). Growth curves (Fig. 1) indicated that (i) the growth rate increased slightly with additional NaCl levels up to 0.4 M, (ii) cells grown in the presence of 0.4 M NaCl entered stationary-phase growth at a lower optical density (OD) than cells grown in the presence of 0.1 to 0.3 M NaCl, (iii) the growth rate decreased significantly with the addition of 0.5 M NaCl, and (iv) cell growth was drastically reduced in the presence of 0.6 M NaCl. Based on these results, MR-1 cells required NaCl levels between 0.1 to 0.3 M for optimal growth (5.8 to 17.5 g/liter) in aerobic MR2A medium. A slight decrease in overall growth was observed at 0.4 M NaCl; 0.5 M NaCl (29.2 g/liter) reduced the maximum growth rate twofold compared to...