We present a high-resolution record of environmental changes during the Mid-Late Holocene obtained from a lake sediment core covering the past 4.87 cal kyr BP in the Schirmacher Oasis, East Antarctica. The magnetic signal of Lake L6 was found to be primarily controlled by catchment-derived ferrimagnetic minerals. The period between 4.87 and 3.35 cal kyr BP is marked by several episodes of cold and warm conditions. Warm and wet conditions prevailed in the region from 3.35 to 2.43 cal kyr BP. Magnetic susceptibility values remained generally low indicating the pedogenic formation of fine magnetic grains. The high values of the chemical weathering indices reflected the warm and wet conditions conducive to chemical weathering. A transition to cold and dry conditions was observed at around 2.43 cal kyr BP, representing the Neoglacial cooling, with high values of magnetic concentration-dependent parameters. Following the Neoglacial period, a return to warm and wet conditions was observed at 1.63 cal kyr BP, coeval with the Medieval Climate Anomaly. Our record shows a Late-Holocene cooling marked by a sudden increase in magnetic susceptibility values, which could represent the Little Ice Age, followed by a shift to warmer conditions near the core top.