The question of whether COVID protease (SARS-CoV-2 M
pro
)
can be blocked by inhibitors has been examined, with a
particularly successful performance exhibited by
α-ketoamide derivative substrates like
13b
of
Hilgenfeld and co-workers (
Zhang
L.
Zhang
L.
32198291
Science
2020
368
409
412
).
After the biological characterization, here density functional
theory calculations explain not only how inhibitor
13b
produces a thermodynamically favorable
interaction but also how to reach it kinetically. The
controversial and unprovable concept of aromaticity here enjoys
being the agent that rationalizes the seemingly innocent role of
histidine (His41 of M
pro
). It has a hydrogen bond
with the hydroxyl group and is the proton carrier of the thiol
of Cys145 at almost zero energy cost that favors the interaction
with the inhibitor that acts as a Michael acceptor.