Endemic species are more impacted by climate change than other taxa. However, assessing the vulnerability of endemics to these changes in some regions, such as the Hyrcanian forest, is limited, despite its importance for biodiversity and ecosystem function. To address the question of expected habitat shifts under climate change across the Hyrcanian ecoregion, we built an ensemble of species distribution models (SDM) under two emission scenarios (RCP 4.5 and RCP 8.5) for 15 endemic woody taxa. To identify the potential priority conservation areas, we also applied a spatial prioritization approach. Overall, our results suggest that the impacts of climate change are more severe on the eastern parts of the region (Golestan) and the Talysh Mountains (north-western Hyrcanian ecoregion) with over 85% and 34% loss of suitable habitats over the next 80 years. The central part of the Alborz Mountains (Mazandaran) and some areas in the Talysh Mountains could be potential climatic refugia under the future conditions for endemic taxa. The most prominent changes are expected for Ruscus hyrcanus, Gleditsia capsica, Acer velutinum, Frangula grandifolia, and Buxus hyrcana. The worrying predicted loss of suitable habitats for most studied taxa would dramatically affect the stability and resilience of forests, threatening thus biodiversity of the Hyrcanian ecoregion. We present the first estimation of the potential risks involved and provide useful support for regional climate-adaptation strategy, indicating potential conservation priority areas for maintaining and preserving its resources. Notably, only 13.4% of areas designated for conservation and management under climate change will be located within the current Hyrcanian protected areas, yet the majority of these areas are classified as low priority.