2020
DOI: 10.1093/database/baaa063
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SPDB: a specialized database and web-based analysis platform for swine pathogens

Abstract: The rapid and accurate diagnosis of swine diseases is indispensable for reducing their negative impacts on the pork industry. Next-generation sequencing (NGS) is a promising diagnostic tool for swine diseases. To support the application of NGS in the diagnosis of swine disease, we established the Swine Pathogen Database (SPDB). The SPDB represents the first comprehensive and highly specialized database and analysis platform for swine pathogens. The current version features an online genome search tool, which n… Show more

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“…The most commonly used sequence data management systems for sheep and goat pathogens include the National Center for Biotechnology Information (NCBI), DNA Data Bank of Japan (DDBJ), and European Molecular Biology Laboratory (EMBL) databases. There are also pathogen sequence databases for specialized species, such as a web-based database platform for swine pathogens (Wang et al, 2020). Platforms that can carry information about infectious diseases and pathogens were widely used in life sciences.…”
Section: Introductionmentioning
confidence: 99%
“…The most commonly used sequence data management systems for sheep and goat pathogens include the National Center for Biotechnology Information (NCBI), DNA Data Bank of Japan (DDBJ), and European Molecular Biology Laboratory (EMBL) databases. There are also pathogen sequence databases for specialized species, such as a web-based database platform for swine pathogens (Wang et al, 2020). Platforms that can carry information about infectious diseases and pathogens were widely used in life sciences.…”
Section: Introductionmentioning
confidence: 99%