Nanostructured SiO 2 shells from diatom microalgae are a promising feedstock for the production of high-performance SiO 2 anodes for next-generation lithium-ion batteries (LIBs), and diatom biomass has been proposed as a carbon source for producing SiO 2 /C nanocomposites of improved cyclability. A standard approach before implementing diatoms as an anode material involves an acid washing step for removing minor impurities from diatom shells. In this work, we perform the first comprehensive analysis on the effect of minor chemical species present on diatom shells on the electrochemical properties of diatom-SiO 2 /C anodes. Unwashed and acid-washed single species cultured diatoms containing their original biomass content were subjected to thermal treatments at 600, 700, 800, and 900 °C, and the resulting SiO 2 /C composites were fully characterized by XRD, BET, TGA, Raman, SEM/EDX, and TEM techniques. The electrochemical performance of the resulting anodes reveals the key role of impurities in improving the cycling properties. While acid-washed SiO 2 /C composites displayed higher surface area, their electrochemical performance was comparable to non-coated SiO 2 . On the other hand, unwashed SiO 2 /C anodes exhibited a specific capacity up to twice that of SiO 2 . The best-performing SiO 2 /C anode was the unwashed diatom-SiO 2 heat-treated at 800 °C, showing a specific capacity of 661 mAh• g −1 after 100 cycles at a current density of 200 mA•g −1 . Results on the beneficial effects of impurities on SiO 2 /C anodes are crucial for an effective implementation of diatoms in LIB technology.