Reproductive genes and traits evolve rapidly in many organisms, including mollusks, algae, and primates. Previously we demonstrated that a family of glycine-rich pollen surface proteins (GRPs) from Arabidopsis thaliana and Brassica oleracea had diverged substantially, making identification of homologous genes impossible despite a separation of only 20 million years. Here we address the molecular genetic mechanisms behind these changes, sequencing the eight members of the GRP cluster, along with 11 neighboring genes in four related species, Arabidopsis arenosa, Olimarabidopsis pumila, Capsella rubella, and Sisymbrium irio. We found that GRP genes change more rapidly than their neighbors; they are more repetitive and have undergone substantially more insertion͞ deletion events while preserving repeat amino acid composition. Genes flanking the GRP cluster had an average K a͞Ks Ϸ 0.2, indicating strong purifying selection. This ratio rose to Ϸ0.5 in the first GRP exon, indicating relaxed selective constraints. The repetitive nature of the second GRP exon makes alignment difficult; even so, K a͞Ks within the Arabidopsis genus demonstrated an increase that correlated with exon length. We conclude that rapid GRP evolution is primarily due to duplication, deletion, and divergence of repetitive sequences. GRPs may mediate pollen recognition and hydration by female cells, and divergence of these genes could correlate with or even promote speciation. We tested crossspecies interactions, showing that the ability of A. arenosa stigmas to hydrate pollen correlated with GRP divergence and identifying A. arenosa as a model for future studies of pollen recognition.T raits mediating reproduction often undergo rapid evolution, effectively restricting successful mating to a subset of available partners. Rapidly changing genes regulate sperm storage, sperm-egg binding, cell fusion, and spermatogenesis (1). In some cases, a selective advantage promotes divergence (positive selection); in other cases, relaxed selective constraints allow rapid change (neutral selection). On occasion, evolutionary changes are so great, or the species studied are sufficiently divergent, that homologs cannot be identified, and the nature of the selective pressures cannot be assessed (2, 3). Both mathematical models and experimental data demonstrate that rapid changes in sexual traits have the capacity to drive speciation and that the coevolution of genes encoding male and female traits can lead to reproductive isolation (4-9).In some plant families, highly divergent genes limit inbreeding through self-incompatibility; many molecules required for selfpollen recognition have been identified (10, 11). In contrast, few components that allow plants to discriminate interspecific pollen are understood. Identifying molecules that regulate this selective process has agricultural applications; the ability to control gene flow between species would facilitate the creation of new hybrids and the containment of genetically modified varieties. Here, we examined a rapid...