Spekkens' toy theory is a non-contextual hidden variable model with an epistemic restriction, a constraint on what the observer can know about the reality. In reproducing many features of quantum mechanics in an essentially classical model, it clarified our understanding of what behaviour can be truly considered intrinsically quantum. In this work, we show that Spekkens' theory can be also used to help understanding aspects of quantum computation -in particular an important subroutine in fault tolerant quantum computation called state injection. State injection promotes fault tolerant quantum circuits, which are usually limited to the classically efficiently simulatable stabilizer operations, to full universal quantum computation. We show that the limited set of fault tolerant operations used in standard state injection circuits can be realised within Spekkens' theory, and that state-injection leads to non-classicality in the form of contextuality. To achieve this, we extend prior work connecting Spekkens' theory and stabilizer quantum mechanics, showing that sub-theories of the latter can be represented within Spekkens' theory, in spite of the contextuality in qubit stabilizer quantum mechanics. The work shines new light on the relationship between quantum computation and contextuality.