We
present scanning tunneling microscopy (STM) measurements combined
with density functional theory (DFT) calculations to study the relationship
between self-assembly characteristics and interaction motifs for organic
molecules [here, N,N′-di(n-butyl)-1,3,8,10-tetramethylquinacridone (TMDBQA)] on a
Ag(110) surface, which exhibits a distinctive surface, featuring regions,
such as atomically flat terraces and steps. It was found that Ag atoms
on the surface terraces are weaker in chemical reactivity than those
on the step edges, which leads to the different molecule–substrate
interactions and thereby, the different self-assembly structures.
The carbonyl oxygen on TMDBQA forms strong coordinative bonds with
Ag atoms at the step edge, which is responsible for the formation
of adsorbate-induced facets, and directs the arrangement of the molecules
with respect to the steps. The DFT calculations demonstrate that with
the facet formation, the adsorption energy between the molecule and
substrate increases and the intermolecular binding energy decreases.
By comparing the hydrogen-bonded self-assembled monolayer of N,N′-di(n-butyl)quinacridone
on the Ag(110) surface, we concluded that the formation of adsorbate-induced
facets is not favored when molecules bind to each other by strong
and directional intermolecular interactions.