Many nearshore fish and invertebrate populations are overexploited even when apparently coherent management structures are in place. One potential cause of mismanagement may be a poor understanding and accounting of stochasticity, particularly for stock recruitment. Many of the fishes and invertebrates that comprise nearshore fisheries are relatively sedentary as adults but have an obligate larval pelagic stage that is dispersed by ocean currents. Here, we demonstrate that larval connectivity is inherently an intermittent and heterogeneous process on annual time scales. This stochasticity arises from the advection of pelagic larvae by chaotic coastal circulations. This result departs from typical assumptions where larvae simply diffuse from one site to another or where complex connectivity patterns are created by transport within spatially complicated environments. We derive a statistical model for the expected variability in larval settlement patterns and demonstrate how larval connectivity varies as a function of different biological and physical processes. The stochastic nature of larval connectivity creates an unavoidable uncertainty in the assessment of fish recruitment and the resulting forecasts of sustainable yields.coastal oceanography ͉ fisheries ͉ marine ecology N earshore ecosystems host a wide variety of marine organisms and are among the most productive environments on Earth. Yet many species harvested from these ecosystems are overfished (1-3), a problem that is especially acute for those invertebrates and fishes with a relatively sedentary adult life stage. One potential cause of overfishing is mismanagement because of a poor understanding and accounting of stochasticity in these systems (4,5). Stochasticity caused by climate variations has long been known to influence the dynamics of ocean ecosystems and the fisheries they support (6). Climate variation affects rates of fecundity and recruitment by altering water temperature, coastal circulation patterns, or the availability of spawning grounds (7,8); such effects can be understood and, given sufficient data, may be predictable. Here, we introduce a mechanism that generates stochasticity in spatial and temporal patterns of larval transport on annual time scales. This stochasticity is inherently unpredictable because of the chaotic nature of coastal circulations and the relatively short larval time scales.Many harvested fish and invertebrates from nearshore ecosystems have a life cycle that includes a pelagic larval stage that can last up to months and a localized benthic adult stage (9, 10). These relatively sedentary adults release hundreds to millions of larvae that are advected and dispersed by ocean currents as they develop competency to settle (9-13). Spawning releases can occur continuously over months or in a few short events. Biotic factors, such as active swimming and vertical migration, also contribute to movement patterns (12,14,15). A small fraction of the larvae settle at suitable sites, and an even smaller fraction recruit to adult...