Ultra high pressure common rail system can realize adjustable injection rate by controlling the relationship between fuel injection and pressurization timing, and then affect the fuel injection characteristics of diesel engine. In order to ascertain the effect law and its formation mechanism of the fuel injection and pressurization pulse width on the fuel injection characteristics of ultra high pressure common rail system, on the basis of introducing the mathematical model of the system, the simulation model of ultra high pressure common rail system was established, and the accuracy of the model was verified by performance experiment, the effect of fuel injection and pressurization pulse width on the fuel injection characteristics of the system under different common rail pressure were analyzed. The results show that with the increase of fuel injection pulse width, the shape of fuel injection rate curve is similar to saddle shape and the proportion of large fuel injection rate range in the whole injection process increases gradually. At the same time, the fuel injection opening delay remains unchanged, but the fuel injection closing delay increases significantly when the fuel injection pulse width is small (0.6~1 ms), while it remains basically unchanged when the fuel injection pulse width is large (1~1.4 ms). With the increase of pressurization pulse width, the shape of fuel injection rate curve is similar to saddle shape and remains unchanged under the condition of small injection pulse width, while the fuel injection rate curve shape may appear similar to the "inverted saddle-shaped" under the condition of large injection pulse width, this is due to the rapid decrease of pressurization pressure caused by the closing of the solenoid valve control signal in the pressure-amplifier device before the end of fuel injection.