Hydrogels are key components of biological tissues and have applications in biomedicine and commercial industry. Many biological tissues are known to strain harden due to the semiflexible nature of the chains. Here, the mechancial properties of poly‐l‐lysine (PLL) hydrogels, whose network chains undergo a random coil–helix transition, are studied as a function of the polypeptide's structural changes. PLL is cross‐linked with poly(ethylene glycol)diglycidyl ether at cross‐link percents ranging from 3% to 6%. The conformation change and mechanical properties are investigated with circular dichroism and small and large amplitude oscillatory shear rheology, respectively. As a function of pH at low cross‐link percents, a transition from strain softening to strain hardening is observed as the network chains become helical that is similar to the behavior of biological filamentous gels and consistent with recent theoretical descriptions of network strain hardening. At higher cross‐link densities, the hydrogels become brittle due to stress concentration in inhomogeneous locations in the network, which is studied with dynamic light scattering. Overall, the random coil–helix transition has a significant effect on the nonlinear mechanical properties of PLL hydrogels. By understanding the hydrogel structure and response to environmental changes, their potential can be expanded as functional biomedical materials.