The spike protein of murine leukemia virus, MLV, is made as a trimer of the Env precursor. This is primed for receptor-induced activation of its membrane fusion function first by cellular furin cleavage in the ectodomain and then by viral protease cleavage in the endodomain. The first cleavage separates the peripheral surface (SU) subunit from the transmembrane (TM) subunit, and the latter releases a 16-residue-long peptide (R) from the TM endodomain. Here, we have studied the distribution of R peptide cleavages in the spike TM subunits of Moloney MLV preparations with partially R-peptide-processed spikes. The spikes were solubilized as trimers and separated with an R peptide antibody. This showed that the spikes were either uncleaved or cleaved in all of its TM subunits. Further studies showed that R peptide cleavage-inhibited Env mutants, L 649 V and L 649 I, were rescued by wild-type (wt) Env in heterotrimeric spikes. These findings suggested that the R peptide cleavages in the spike are facilitated through positive allosteric cooperativity; i.e., the cleavage of the TM subunit in one Env promoted the cleavages of the TMs in the other Envs. The mechanism ensures that protease cleavage in newly released virus will generate R-peptide-cleaved homotrimers rather than heterotrimeric intermediates. However, using a cleavage site Env mutant, L 649 R, which was not rescued by wt Env, it was possible to produce virus with heterotrimers. These were shown to be less fusion active than the R-peptidecleaved homotrimers. Therefore, the cooperative cleavage will speed up the maturation of released virus for fusion competence.The spike protein of murine leukemia virus (MLV) is assembled in the endoplasmic reticulum (ER) of the producer cell from three copies of the Env precursor protein gp80 (10, 18). The trimeric spike undergoes two proteolytic cleavage events to prepare it for receptor-induced activation of the membrane fusion process. The first one is mediated by the furin of the host cell and takes place when the spike passes the trans-Golgi network on its way from the ER to the cell surface (3,6). This cleavage separates the polypeptide of the peripheral surface (SU) subunit from that of the transmembrane (TM) subunit (7). It also releases the Env fusion peptide at the membrane-distal amino-terminal region of the TM (26). The second cleavage is mediated by the viral protease and takes place inside newly formed particles. Here, the protease cleaves not only the Gag and the Gag-Pol precursors into the mature internal proteins (matrix, p12, capsid, and nucleocapsid proteins) and the viral enzymes (protease, polymerase, and integrase) but also the endodomain of the TM subunit of Env. A 16-residue-long C-terminal peptide, the R peptide, is cleaved off, generating p15E from the TM precursor, Pr15E (5, 7, 17). By studying cell-associated Env with an R peptide truncation, it was shown that the R peptide inhibited the Env from becoming activated for membrane fusion by the receptor (14, 15).The R peptide cleavage site QAL 649 /VL...