Recent crystal structures of G protein-coupled receptors (GPCRsG protein-coupled receptors (GPCRs), 2 which comprise the largest family of cell surface receptors, are characterized by seven-transmembrane (7-TM) domains joined by three extracellular loops (ECLs) and three intracellular loops. It is of fundamental importance to understand how these receptors, which share a common architecture, are activated by a variety of structurally diverse ligands. In this way, therapeutics that are better targeted to mimic or block these molecules can be designed. The crystal structure of bovine rhodopsin provided the first structural insight into this family of receptors (1) and aided much of our understanding of the molecular mechanisms of GPCR activation, in combination with a number of biochemical and biophysical studies.The gonadotropin-releasing hormone (GnRH) receptor is a member of the rhodopsin-like subfamily of GPCRs. GnRH I is released in pulses from the hypothalamus into the portal blood system where it is transported to the anterior pituitary gland. Here it binds to GnRH receptors expressed on gonadotrope cells, which predominantly causes G q/11 activation. The resultant signaling pathway brings about the release of luteinizing hormone (LH) and follicle-stimulating hormone (FSH) to regulate steroidogenesis and gametogenesis. As such, GnRH analogues are used extensively to treat many hormone-dependent diseases, including infertility, endometriosis, benign prostatic hyperplasia, and breast cancer (2). However, it has become evident that GnRH also acts on many cells outside of the pituitary gland. There are two endogenous ligands, hypothalamic GnRH I and extrahypothalamic GnRH II, despite there being only one functional receptor subtype expressed in humans. Both ligands exert their effects through the same receptor subtype, although they exhibit distinct pharmacological and signaling profiles (3). Different physiological outcomes are proposed to be mediated by different receptor coupling to G s (4) or G i/o (5) in addition to the classical G q/11 pathway, but this remains controversial (6). However, we have shown that the human GnRH receptor can activate other G q/11 -independent signaling pathways such as G 12/13 (7). Hence, the divergent signaling is believed to be mediated by different receptor-active conformations induced by differential ligand-receptor interactions. Binding of GnRH I and II to the GnRH receptor may cause different intramolecular interactions to be broken, allowing the receptor to adopt varied conformations and thus enabling divergent signaling pathways. We have termed this ligand-induced selective signaling (3,8,9).Investigations into the structure of the GnRH receptor and identification of ligand binding contacts between GnRH and its receptor will enable refinement of molecular models for structure-based drug design. Previous site-directed mutagenesis studies and modeling have identified multiple contact sites of the GnRH receptor with its ligands (2, 3, 10 -12). As these pep-