Numerous investigations have been conducted to explore the structural phase transition in antiferromagnetic 3d transition metal monoxides accompanied by appearance of magnetic phase transition. However, how the spins induce distortion in the high symmetric structure has not yet been fully understood. In this study, the monoxide NiO is used as an example to investigate what lowers the structural symmetry. By comparing two different magnetic structures, our results reveal that the spin–lattice coupling is responsible for such a structural distortion. Then, a spin–lattice model, including the strain component, is constructed to simulate the transition procedure. Moreover, the results from the first-principles calculations are used to compare with our model results. Both first-principles calculations and model simulations clarify the structural phase transition caused by a unique magnetic arrangement.