2014
DOI: 10.4161/chan.28854
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Structural order in Pannexin 1 cytoplasmic domains

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Cited by 14 publications
(12 citation statements)
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“…3; Table 1). Notably, a previously identified β-strand 30 aligned with HCS5 (Table 1), though it was not followed by an α-helix, as might be anticipated. The multiple HCS consensus sequences, the general promiscuity of LRR domain secondary structure 13 , and the previously identified mixture of α-helices and β-strands 30 suggest the presence of a putative LRR domain within the Panx1CT.…”
Section: Discussionsupporting
confidence: 52%
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“…3; Table 1). Notably, a previously identified β-strand 30 aligned with HCS5 (Table 1), though it was not followed by an α-helix, as might be anticipated. The multiple HCS consensus sequences, the general promiscuity of LRR domain secondary structure 13 , and the previously identified mixture of α-helices and β-strands 30 suggest the presence of a putative LRR domain within the Panx1CT.…”
Section: Discussionsupporting
confidence: 52%
“…To start to investigate the possibility of a larger LRR domain within Panx1, we examined the relationship between reported secondary structures commonly associated with LRR motifs/domains and the identified putative LRR and HCS motifs. Since an HCS usually forms a β-sheet and a VS often forms an α-helix 13,17,20 , we examined whether previously reported 30 in silico identified putative secondary structures (partially confirmed using circular dichroism) in the Panx1CT directly aligned with HCS1-HCS5 (Fig. 3; Table 1).…”
Section: Discussionmentioning
confidence: 99%
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“…The region of Panx1 containing the amino acids 191 to 200 has a high propensity to form α helix structure, which are known to constitute a fundamental recognition element in many protein-protein interactions (7, 63). α Helix–mediated protein-protein interactions are practical targets for chemical design of small molecular inhibitors (64).…”
Section: Discussionmentioning
confidence: 99%
“…However, the absence of detectable secondary structure could also be a consequence of instability, in agreement with the relatively low confidence of secondary structure prediction for this region. For example, cytoplasmic domains of connexins have α-helical structure as part of the complete membrane-anchored molecule, or when membrane-tethered, but isolated cytoplasmic domains exhibit detectable helical structure only in aqueous solution containing TFE 35 36 37 . Similarly, the helix-stabilizing effect of TFE in hen lysozyme is observed only in those regions of the polypeptide chain that intrinsically tend to form helical secondary structure elements 38 .…”
Section: Resultsmentioning
confidence: 99%