The glucagon-like peptide 1 (GLP1) receptor is a member of Family B G protein-coupled receptors and represents an important drug target for type 2 diabetes. Despite recent solution of the structure of the amino-terminal domain of this receptor and that of several close family members, understanding of the molecular basis of natural ligand GLP1 binding to its intact receptor remains limited. The goal of this study was to explore spatial approximations between specific receptor residues within the carboxyl terminus of GLP1 and its receptor as normally docked. Therefore, we developed and characterized two high affinity, full-agonist photolabile GLP1 probes having sites for covalent attachment in positions 24 and 35. Both probes labeled the receptor specifically and saturably. Subsequent peptide mapping using chemical and proteinase cleavages of purified wild-type and mutant GLP1 receptor identified that the Arg 131 -Lys 136 segment at the juxtamembrane region of the receptor amino terminus contained the site of labeling for the position 24 probe, and the specific receptor residue labeled by this probe was identified as Glu 133 by radiochemical sequencing. Similarly, nearby residue Glu 125 within the same region of the receptor amino-terminal domain was identified as the site of labeling by the position 35 probe. These data represent the first direct demonstration of spatial approximation between GLP1 and its intact receptor as docked, providing two important constraints for the modeling of this interaction. This should expand our understanding of the molecular basis of natural agonist ligand binding to the GLP1 receptor and may be relevant to other family members.G protein-coupled receptors (GPCRs) 2 are the largest group of membrane receptors with seven transmembrane domains and represent targets for over 30% of approved drugs. Understanding of the molecular basis of ligand binding and activation of these receptors will facilitate the development and refinement of drugs acting at these targets. Currently, the molecular basis of ligand binding and activation of Family B GPCRs is less well understood than that of the larger Family A, where high resolution crystal structures have recently been described for several members (1-4).A characteristic structural feature of this family is a long and structurally complex extracellular amino-terminal domain containing six conserved cysteine residues that form disulfide bonds important for stabilizing the folded structure. This domain has been suggested to interact with the carboxyl-terminal region of the natural peptide ligands, based on structure-activity relationship, site-directed mutagenesis, and chimeric receptor studies (5-10), and this is a consistent theme throughout their family.Insights into the structure of the predominant ligand binding domain, the amino terminus of the Family B GPCRs, have substantially advanced with the solution of NMR and crystal structures of the isolated ligand-bound amino terminus of the receptors for corticotrophin-releasing factor (11-13...