With 54 described species, Endonura is one of the most species-rich genera of the Neanurinae. The taxon is characterised by the presence of 0–2 ocelli, separate tubercles Di and De with the non-crossed type of chaetotaxy on the head, and two or three tubercles on the fifth abdominal tergite. Four new species from the Crimea and the Caucasian region have been described based on adult specimens: Endonura armeniacasp. nov., E. cochleariferasp. nov., E. crimicasp. nov., and E. duplexsp. nov. A phylogenetic analysis of the genus Endonura using 70 characters of adult external morphology is presented. Two methods were chosen to examine different approaches to the reconstruction of evolutionary relationships: Maximum Parsimony (MP) and Bayesian Inference (BI). Besides supporting Endonura monophyly both analyses failed to resolve any of the deeper relationships within the genus. All known species within the genus are grouped into two main clades, A and D. Both of these clades have members distributed throughout Europe, the Caucasus and the western part of Central Asia. Endonura crimicasp. nov. can be considered as an intermediate between these two clades.