1996
DOI: 10.1038/379225a0
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Structure and mechanism of DNA topoisomerase II

Abstract: The crystal structure of a large fragment of yeast type II DNA topoisomerase reveals a heart-shaped dimeric protein with a large central hole. It provides a molecular model of the enzyme as an ATP-modulated clamp with two sets of jaws at opposite ends, connected by multiple joints. An enzyme with bound DNA can admit a second DNA duplex through one set of jaws, transport it through the cleaved first duplex, and expel it through the other set of jaws.

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Cited by 801 publications
(725 citation statements)
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“…Topoisomerase I covalently binds to double-stranded DNA and induces transient single strand breaks to allow passage of one strand, 23 whereas topoisomerase II induces transient double strand breaks to allow passage of both strands. 24 Resistance to topoisomerase poisons has been mainly attributed to mutations in topoisomerase genes, to enhanced repair, and to overexpression of P-glycoprotein (Pgp), multidrug resistance protein (MRP), and breast cancer resistance protein (BCRP). 25,26 In addition, loss of MLH1 activity has also been reported to be associated with resistance to the topoisomerase II poisons doxorubicin and etoposide, 9,15 suggesting a role of mismatch repair in topoisomerase II poison-mediated cell killing.…”
Section: Discussionmentioning
confidence: 99%
“…Topoisomerase I covalently binds to double-stranded DNA and induces transient single strand breaks to allow passage of one strand, 23 whereas topoisomerase II induces transient double strand breaks to allow passage of both strands. 24 Resistance to topoisomerase poisons has been mainly attributed to mutations in topoisomerase genes, to enhanced repair, and to overexpression of P-glycoprotein (Pgp), multidrug resistance protein (MRP), and breast cancer resistance protein (BCRP). 25,26 In addition, loss of MLH1 activity has also been reported to be associated with resistance to the topoisomerase II poisons doxorubicin and etoposide, 9,15 suggesting a role of mismatch repair in topoisomerase II poison-mediated cell killing.…”
Section: Discussionmentioning
confidence: 99%
“…A priori, whether a positive or a negative node will be inverted by an intramolecular event of segment transport is expected to depend on two factors: the conformation of the DNA and the three-dimensional structure of the topoisomerase-DNA complex. Recent work on the three dimensional structure of a 92-kDa fragment of yeast DNA topoisomerase II has provided a detailed model of the complex between the enzyme and a G-segment (Berger et al 1996), but no information is available on the relative orientation of a pair of segments prior to segment crossing. Figure 5 depicts an arbitrary pair of contiguous G-and Tsegments forming either a negative or a positive node.…”
Section: Probability Of Yeast Dna Topoisomerase Ii-mediated Unlinkingmentioning
confidence: 99%
“…Recent biochemical (Roca & Wang 1992Roca et al 1993Lindsley & Wang 1993) and structural (Berger et al 1996) studies of yeast DNA topoisomerase II have provided substantial evidence in favour of an ATP-modulated protein-clamp model (Roca & Wang 1992. In this model, a free or DNA-bound enzyme is assumed to have two major conformations: a closed-clamp form when ATP or its nonhydrolysable b , -imido analogue AMPPNP is bound to the enzyme, and an open-clamp form in the absence of bound nucleotide.…”
Section: Introductionmentioning
confidence: 99%
“…Topoisomerase IIa (Topo IIa) is a vital nuclear DNA-binding enzyme that controls and modifies the topologic states of DNA (Berger et al, 1996) by combining nuclease, helicase and ligase activities. Topo IIa reduces DNA supercoiling and twisting by creating a double-strand nick that enables the passage of a second DNA double-strand through the break and subsequent religation of the cleaved DNA strand.…”
mentioning
confidence: 99%