Chlamydomonas flagellar sexual agglutinins are responsible for the adhesion of opposite mating-type (plus and minus) gametes during the first stages of mating. Purification and partial characterization of the plus agglutinin was previously reported (Adair, W. S., C. J. Hwang, and U. W. Goodenough, 1983, Cell, 33:183-193). Here we characterize the purified minus molecule. We show it to be a high molecular weight, hydroxyproline-rich glycoprotein that migrates in the 3% stacking region of an SDS-polyacrylamide gel and is absent from two nonagglutinating minus mutants. Plus and minus agglutinins are remarkably similar, although nonidentical, in amino acid composition, molecular morphology, and reactivity in vivo and in vitro with monoclonal antibodies raised against the plus agglutinin. Moreover, the adhesiveness of both plus and minus agglutinins, when coupled to agarose beads, is abolished by thermol-,/sin, trypsin, periodate, alkaline borohydride, reducing agents, or heat, but unaffected by exoor endoglycosidases. The minus agglutinin, however, migrates just ahead of the plus molecule on SDS PAGE, is excluded from an anion-exchange (Mono Q) column, elutes earlier during hydrophobic interaction (Bio-gel TSK Phenyl 5PW) chromatography, and is sensitive to chymotrypsin digestion (unlike the plus agglutinin); therefore, it differs from the plus agglutinin in apparent molecular weight, net charge, relative hydrophobicity and proteolytic susceptibility. Nevertheless, our results generally demonstrate a high degree of homology between these complementary cell-cell recognition/adhesion molecules, which suggests that they are specified by genes that have a common evolutionary origin.Chlamydomonas reinhardi mating-type plus (mt +) and mating-type minus (rot-) gametes recognize and adhere to one another to initiate mating via sexual agglutinins located on their flagellar surfaces (reviewed in references 1 and 2). The processes of gametic recognition and flagellar adhesive interactions are extremely specific for both the mating-type and species of Chlamydomonas (3), features attributable to the agglutinin molecules themselves (4, 5). The plus and minus agglutinins can both be extracted in a biologically active form from mt ÷ and mr-gametes by EDTA (4, 6) and quantitated using an in vitro bioassay (4). The plus species has been purified by gel filtration chromatography and identified as a high molecular weight, hydroxyproline-containing, fibrous glycoprotein that is present as an extrinsic component of the mt+ flagellar surface (4, 5, 7). Recently, Saito and Matsuda (8) have followed similar protocols to extract minus agglutinin and have fractionated the activity by hydroxyapatite chromatography. They report that the minus agglutinin is also a high molecular weight glycopolypeptide.To investigate the molecular mechanism that governs agglutinin-mediated intracellular recognition and adhesion in Chlamydomonas, it is important that both adhesins be well characterized. This paper describes the characterization of the mi...