Increasing concentrations of 2,4-dinitrophenol exert a biphasic effect on the 0 2 consumption of mitochondria oxidizing certain carboxylic acid substrates in 0.15 M KC1 in the presence of adenosine triphosphate (ATP) or adenosine diphosphate (ADP) and Mg2+. This effect of 2,4-dinitrophenol is modified by a soluble cytoplasmic cellular fraction. The modification consists of a large increase of 0 2 consumption within a limiting range of concentrations of 2,4-dinitrophenol.The cytoplasmic component responsible for this effect was obtained from rat liver, kidney, and heart by gel filtration on Sephadex G-25 and G-50 as a macromolecular complex of apparent molecular weight of 5000-6000. The metabolically active cyto-D uring experiments concerned with the mechanism of action of synthetic fluorocarboxylic acids in tissue homogenates Loh and Kun, 1966;Kun et a[., 1966a;, 2,4-dinitrophenol (DNP) was employed in order to simplify metabolic control in this system by eliminating the effects of oxidative phosphorylation. It was assumed that in multienzyme systems kinetic consequences of competitive (Le., substrate type) inhibitors would be easier to evaluate in the absence of oxidative phosphorylation. In the course of preliminary studies, which were intended to test this assumption, it was found that the soluble fraction of tissue homogenates (cytosol) markedly influenced the metabolic effect 1 The term cyrosol, introduced by H. A. Lardy, denotes the particle-free supernatant of tissue homogenates (in our case prepared in 0.15 M KC1) obtained after ultracentrifugation at 726 105,OOOg for 60 min. plasmic fraction inhibits the activating effect of 2,4-dinitrophenol on mitochondrial adenosine triphosphatase (ATPase) only in the presence of carboxylic acid substrates. Prerequisities for in uitro metabolic action of the cytoplasmic fraction are preservation of mitochondrial membrane system and presence of ADP or ATP (adenosine monophosphate is ineffective), isotonic KCl (present both during preparation of the fraction and during metabolic experiments), and a specific concentration of 2,4-dinitrophenol, which is characteristic for certain substrates and varies with the tissue source of mitochondria. A possible interpretation of these results is proposed in terms of extramitochondrial regulation of mitochondrial permease systems.of DNP on mitochondria. More detailed analyses of this phenomenon led to the isolation of a cytoplasmic macromolecular fraction (CMF) from the cytosol of liver, kidney, and heart which could replace cytosol with respect to an apparent stimulation of the oxidation of certain carboxylic acids by mitochondria. Because of the unusual effects of CMF on mitochondrial metabolism, studies were initiated in order to clarify its mechanism of action, composition, and possible biological significance. The present report deals with a method of recognition and isolation of CMF, providing the foundation for further work. A preliminary paper describing the stimulation of glutamate metabolism by CMF appeared in the form of ...