Aiming at the use of glass fiber reinforced poly‐ether‐ether‐ketone (GF/PEEK) with low laser absorbance in laser assisted tape winding/placement (LATW/LATP), a method for dyeing GF/PEEK prepreg with nanoparticle fillers (NFs) is presented. First, the effects of carbon black (CB) and graphite (G) NFs on composites laser absorbance and reflection pattern were quantified, and the complex refractive index model was derived. Next, the effects of NFs on composites transverse thermal conductivity were tested, and the accuracy of four thermal conductivity prediction models were compared. Finally, the effects of NFs on composites interlayer performance were studied. The optical test results showed that NFs could improve laser absorbance while not changing reflection pattern, and the increase rate of absorbance for CB was higher than for G. As calculated by complex refractive index model, GF/PEEK with 1‐layer thickness could achieve complete laser absorption by addition of either 2.74%CB or 3.78%G. The thermal conductivity test results showed that NFs could improve composites transverse thermal conductivity. The increase rate of thermal conductivity for G was higher than for CB. Among the four prediction model, the Lewis‐Nielsen model had correct prediction regularity and was within 10% predict deviation. Based on this model, the transverse thermal conductivity of GF/PEEK/2.74%CB was 0.557 W/m K, and of GF/PEEK/3.78%G was 0.592 W/m K. The mechanical test results showed that the CB loading ≤4% had little effect on interlayer performance, while the G decreased interlayer performance. Consequently, adding CB at a low loading is a better way to realize GF/PEEK application in LATW/LATP.