Free‐living amebae belonging to the genera
Naegleria
,
Acanthamoeba
, and
Balamuthia
can infect humans and other animals and cause potentially severe, life threatening disease. This chapter presents a list of clinical syndromes caused by free‐living amebae infections. Free‐living amebae can be cultivated in axenic conditions or in the presence of a mammalian cell culture for research purposes. The real‐time multiplex PCR assay is a fast, sensitive, and robust assay that detects all three pathogenic free‐living amebae,
Acanthamoeba
spp.,
B. mandrillaris
, and
N. fowleri
, simultaneously in a single specimen and has many advantages over conventional PCR. All clinical specimens should first be examined microscopically, and if amebae are visualized, then the clinician should be immediately notified.