Abstract. This work describes a computational study on supersonic flow in a microchannel composed of two parallel plates. Effects of incomplete surface accommodation on the flowfield structure have been investigated by employing the Direct Simulation Monte Carlo (DSMC) method in combination with the Cercignani-Lampis-Lord (CLL) gas-surface interaction model. The aim of this work is to investigate the disturbance developments due to differences in the accommodation coefficients on the lower and upper surfaces of the microchannel. The results presented highlight the sensitivity of the primary properties to changes on the gas-surface accommodation coefficients. It is found that accommodation coefficients have different influence on velocity, density, pressure and temperature for the conditions investigated.