Metal ion-carbon based nanomaterials served as nanozymes to mimic the biocatalytic performance of natural enzymes. However, there are still challenges in constructing carbon dots (CDs)−metal nanozymes with the same coordination structure based on coordination chemistry and revealing the effect of metal ion species on enzyme-mimicking catalyzed activities. Herein, EDTA-functionalized carbon dots−metal (CDs EDTA -Me) nanozymes with different metal ions (Fe 3+ , Cu 2+ , and Co 2+ ) and the same coordination structures are synthesized based on coordination chemistry. Species of metal ions of CDs EDTA -Me nanozymes determines enzyme-mimicking activities. CDs EDTA -Fe, CDs EDTA -Cu, and CDs EDTA -Co display significant peroxidase (POD)-mimicking, superoxide dismutase (SOD)-mimicking activities, and hydroxyl radical (•OH) scavenging ability, respectively. Compared with horseradish peroxidase, the affinity of CDs EDTA -Fe to H 2 O 2 is improved by 47 times. The V m value of CDs EDTA -Fe with TMB as the substrate is 1.19 × 10 −7 M s −1 . POD-mimicking activity of CDs EDTA -Me nanozymes increases linearly with the increase of stability constants of CDs EDTA -Me, which indicates that the POD-mimicking activity of CDs EDTA -Me can be predicted by stability constants of CDs EDTA -Me. CDs EDTA -Me provides a coordination chemistry strategy for the construction of CDs-metal nanozymes and rational improvement of enzyme-mimicking activities.N atural enzymes use available elements and molecular structures to catalyze various biochemical reactions to maintain the normal operation of organism metabolism and physiology. 1−4 However, the deficiencies such as high cost, poor stability, and difficult storage have seriously hindered their application. 5,6 In recent years, the growing demands in the field of enzyme-catalyzed biotherapy have driven innovation in artificial enzymes, especially artificial metalloenzymes. 7−13 The metal coordination center in natural enzymes usually affects the type of enzyme-catalyzed transformation, such as iron, copper, and zinc respectively used for cytochrome oxidase, superoxide dismutase, and carbonic anhydrase, etc. 14 Various metal-ion-complex nanozymes have been constructed to more realistically simulate natural enzyme catalytic centers. 15,16 Carbonaceous substrate nanozymes with different coordination environments and metal types have been