SUMMARYMany stem cells undergo asymmetric division to produce both a self-renewing stem cell and a differentiating daughter cell. We previously reported that in male Drosophila germline stem cells (GSCs), preexisting (old) histone H3 is segregated to the self-renewed stem cell, whereas the daughter incorporates newly synthesized (new) H3. Here, we show that histone H4 is likewise segregated asymmetrically, while histones H2A and H2B are segregated symmetrically. Using superresolution imaging, we visualize spatially separable old and new H3 distributions in interphase GSC nuclei and on isolated replicating chromatin fibers. Furthermore, using both superresolved chromatin fibers and proximity ligation assay, we demonstrate that old H3 are preferentially retained on the leading strand while new H3 preferentially associate with the lagging strand. Finally, using a dual nucleoside analog incorporation assay, the temporal separation between leading strand and lagging strand synthesis is detectable. Together, these results demonstrate that the spatial and temporal asymmetries inherent to DNA replication may serve to bias histone incorporation, suggesting an unappreciated role for DNA replication in asymmetrically dividing cells.