A theoretical study on the two-dimensional, threedimensional quantitative structure-activity relationships and docking analysis of a novel series of ethynyl-3-quinolinecarbonitriles acting as Src inhibitors has been carried out. To correlate the cSrc kinase-inhibition activity of these compounds with the two-dimensional and three-dimensional structural properties for 39 known compounds, some excellent quantitative structure-activity relationships models with satisfying internal and external predictive abilities were established. A combined method of the density functional theory, molecular mechanics and statistics as well as the comparative molecular field analysis was applied to develop two-dimensional-and threedimensional-quantitative structure-activity relationship models. The leave-one-out cross-validation q 2 values of two-dimensional-quantitative structure-activity relationship and comparative molecular field analysis models are 0.834 and 0.812, respectively. The predictive abilities of these models were further validated by the test set including 10 compounds, and the predicted IC 50 values were in a good agreement with the experimental ones. The appropriate binding orientations and conformations of these compounds interacting with c-Src kinase were also revealed by the docking study. Based on two-dimensionaland three-dimensional-quantitative structureactivity relationship results along with docking analysis, some important factors responsible for inhibitory activity of this series of compounds were discussed in detail. These factors can be summarized as follows: selecting certain large-size substituent R 2 , increasing the negative charge of the first atom of substituent R 1 and the net charge of the C 15 atom on ring-C will enhance the activity. Meanwhile, the interaction information between protein and ligand was also revealed in detail. These results help to understand the action mechanism and designing novel potential Src inhibitors. Based on the established models and some designing considerations, three new compounds with rather high predicted Src-inhibitory activity have been theoretically designed and presented to experimenters for reference.Key words: comparative molecular field analysis, c-Src, docking study, ethynyl-3-quinolinecarbonitriles, quantitative structure-activity relationship Received 6 March 2011, revised 11 February 2012 and accepted for publication 25 February 2012 c-Src, the oldest and most studied class of non-receptor protein tyrosine kinase, is the prototypic member of a family of kinases (Src Family Kinases, SFKS), which plays a pivotal role in signaling transduction pathways controlling cell growth, proliferation, invasion, and apoptosis. In most normal cells, c-Src is highly regulated at low levels and maintained in an inactive conformation. However, in many human tumor types, c-Src kinase is unregulated (1,2). Recently, many reports have shown that the over-expression or over-activation of c-Src is associated with a variety of human solid tumors, including breast (3), colo...