Plasmodione (
PD
) is a potent antimalarial redox-active
drug acting at low nM range concentrations on different malaria parasite
stages. In this study, in order to determine the precise
PD
protein interactome in parasites, we developed a class of (pro-)activity-based
protein profiling probes (ABPP) as precursors of photoreactive benzophenone-like
probes based on the skeleton of
PD
metabolites (
PDO
) generated in a cascade of redox reactions. Under UV-photoirradiation,
we clearly demonstrate that benzylic oxidation of 3-benzylmenadione
11
produces the 3-benzoylmenadione probe
7
, allowing
investigation of the proof-of-concept of the ABPP strategy with 3-benzoylmenadiones
7
–
10
. The synthesized 3-benzoylmenadiones,
probe
7
with an alkyne group or probe
9
with
-NO
2
in
para
position of the benzoyl chain,
were found to be the most efficient photoreactive and clickable probes.
In the presence of various H-donor partners, the UV-irradiation of
the photoreactive ABPP probes generates different adducts, the expected
“benzophenone-like” adducts (pathway 1) in addition
to “benzoxanthone” adducts (via two other pathways,
2 and 3). Using both human and
Plasmodium falciparum
glutathione reductases, three protein ligand binding sites were
identified following photolabeling with probes
7
or
9
. The photoreduction of 3-benzoylmenadiones (
PDO
and probe
9
) promoting the formation of both the corresponding
benzoxanthone and the derived enone could be replaced by the glutathione
reductase-catalyzed reduction step. In particular, the electrophilic
character of the benzoxanthone was evidenced by its ability to alkylate
heme, as a relevant event supporting the antimalarial mode of action
of
PD
. This work provides a proof-of-principle that (pro-)ABPP
probes can generate benzophenone-like metabolites enabling optimized
activity-based protein profiling conditions that will be instrumental
to analyze the interactome of early lead antiplasmodial 3-benzylmenadiones
displaying an original and innovative mode of action.