The purpose of the article is to determine the development trends of the best available technique installation mechanism and innovative institutions as suppliers of Russian analogues of such techniques in Russia and its regions. The best available techniques are considered in this article as the latest techniques, initially formed in the innovative sector with their subsequent implementation and inclusion in the category of the best available ones. The sources of this technique are considered as regional innovation systems, in which the innovative investigations are created and tested. In this regard, when forming a mechanism for the best available technique installation in the Russian regions, including the forest sector, it is necessary to ensure communication with the innovation sector, which would form the industrial enterprises’ demand for innovative environmental investigations. Taking into consideration the manufacturing industries’ linkage, the necessary innovations in the forest sector have been analyzed. Forestry is a supplier of raw materials for furniture and paper industries. Therefore, the modernization of reference books on the industries should be appropriate and comply with the programs for the forestry development in the Russian Federation.