Correlation between energetics of collisionally activated decompositions, interaction energy and biological potency of carbamate FAAH inhibitorsMass spectrometry (MS) might usefully be employed to study the mechanism of action, the structure-activity relationships (SARs) or the side effects of pharmacologically active compounds that undergo bioactivation to electrophilic intermediates or nucleophilic attack prior to the development of their effects, although the literature mainly report examples in which MS was employed to characterize reactive metabolites. 1 Quite early we used MS techniques to establish quantitative SARs for some potential anticancer agents (aryl and heteroaryl triazenes), 2 -4 and more recently for novel inhibitors of the fatty acid amide hydrolase (FAAH) enzyme. 5 The latter compounds are characterized by an N-alkylcarbamic acid O-aryl ester structure, and they can be exemplified by the irreversible and systemically active inhibitor cyclohexylcarbamic acid 3 0 -carbamoylbiphenyl-3-yl ester (URB597). 6 The chemical rationalization of the mode of action of these FAAH inhibitors and their SARs were approached by modeling studies 7 -9 and also by MS techniques. 5 Irreversible enzyme inactivation is envisaged to occur through two distinct and consecutive processes (Scheme 1), i.e. formation of a noncovalent complex (recognition step), and nucleophile attack to the carbamate by Ser241 10,11 leading to its carbamoylation and to irreversible inactivation of the enzyme (inactivation step). The recognition step is related to stereoelectronic complementarity between the inhibitor and the active site of the enzyme and it was rationalized by molecular modeling studies, 8,9 whereas the inactivation reaction may be related to the propensity of the C(O)-O bond to be cleaved and it may be described by suitable indicators of bond reactivity. In this particular case, the second step was studied by breakdown curves, 12 relative to ESI-generated protonated molecules, which, taking place under collisional conditions during resonance excitation in an ion trap, exclusively gave fragments related to the C(O)-O bond cleavage. 5 The crossing points (CPs) (corresponding to the collision energy necessary to fragment 50% of the precursor ion population) between the decreasing [MH] C ion abundance and the increasing ion fragment abundance w (Scheme 2) were related to the energetics Ł Correspondence to: P. Traldi, CNR-ISTM, Corso Stati Uniti 4,