The assembly and disassembly of ribonucleoproteins (RNPs) are dynamic processes that control every step of RNA metabolism, including mRNA stability. However, our knowledge of how RNP remodeling is achieved is largely limited to RNA helicase functions. Here, we report a previously unknown mechanism that implicates the ATPase p97, a protein-remodeling machine, in the dynamic regulation of mRNP disassembly. We found that p97 and its cofactor, UBXD8, destabilize p21, MKP-1, and SIRT1, three established mRNA targets of the RNA-binding protein HuR, by promoting release of HuR from mRNA. Importantly, ubiquitination of HuR with a short K29 chain serves as the signal for release. When cells are subjected to stress conditions, the steady-state levels of HuR ubiquitination change, suggesting a new mechanism through which HuR mediates the stress response. Our studies reveal a new paradigm in RNA biology: nondegradative ubiquitin signaling-dependent disassembly of mRNP promoted by the p97-UBXD8 complex to control mRNA stability.[Keywords: HuR; mRNA stability; ubiquitin] Supplemental material is available for this article. RNA-binding proteins (RBPs) recognize specific cis-regulatory mRNA elements to form ribonucleoprotein (RNP) complexes, which control every aspect of the life of a mRNA from pre-mRNA processing to mRNA localization, translation, and turnover (Moore 2005;Keene 2007). A different array of proteins is loaded onto pre-mRNA/ mRNA during every step of post-transcriptional mRNA metabolism, making assembly and disassembly of mRNPs a highly dynamic process. Precise regulation of this process is essential, as failure to assemble or disassemble an appropriate mRNP complex leads to disruption of downstream events such as mRNA export, translation, and decay, which have direct impacts on gene expression (Hieronymus and Silver 2004;Keene 2010;Wilusz and Wilusz 2010). Despite its fundamental importance, our knowledge of mRNP remodeling is limited and mostly emerged from two types of studies involving either RNA helicases or individual protein factors that associate with a defined mRNP in a spatially and/or temporally regu- RNA helicases of the DEAD-box family are an important group of RNA-remodeling proteins. These proteins are ATPases that use ATP to unwind RNA duplexes and remodel RNA-protein complexes (Linder and Jankowsky 2011; Pyle 2011). Distinct RNA helicases play important roles in every step of RNA metabolism (Linder and Jankowsky 2011). However, given the central role of RNA molecules in every aspect of cellular metabolism, it is expected that other types of ATPases function as additional motor proteins in RNA metabolism. In this study, we describe a previously uncharacterized role of a member of the AAA (ATPases associated with diverse cellular activities) family of proteins, vasolin-containing protein (VCP)/p97 (also called cdc48 in yeast), in mRNA stability control.p97 is considered a protein-remodeling machine (Meyer et al. 2012). It has two ATPase domains, D1 and D2, and uses the energy of ATP hydrolysis to r...