The temporal and spatial origins and evolution of the genus
Eranthis
have not been previously studied. We investigated the speciation and establishment histories of four
Eranthis
species:
Eranthis byunsanensis
,
E. pungdoensis
,
E. stellata
, and
E. pinnatifida
. The sampling localities were Korea, Japan, Jilin in China, and the area near Vladivostok in Primorskiy, Russia. We used 12 chloroplast microsatellite loci (
n
= 935 individuals) and two chloroplast noncoding regions (
rpl16
intron,
petL
‐
psbE
intergenic spacer;
n
= 33 individuals). The genetic diversity, genetic structure, phylogenetic relationships of the four species were analyzed, and their ancestral areas were reconstructed. The high genetic diversity of the Jeju island population of
E. byunsanensis
and Russian populations of
E. stellata
indicated these species’ northward and southward dispersal, respectively. The genetic structure analyses suggest that the populations in these four species have limited geographical structure, except for the Chinese
E. stellata
population (SCP). The phylogenetic analyses suggest that
E. byunsanensis
and
E. pinnatifida
are sister species and that Chinese SCP may not belong to
E. stellata
. The ancestral area reconstruction revealed that the most recent common ancestor of the four species existed in the current Chinese habitat of
E. stellata
. This study shows that
E. byunsanensis
and
E. pinnatifida
originated from a southern
Eranthis
species and speciated into their current forms near Jeju island and near western regions of Japan, respectively, during the Miocene.
E. stellata
may have dispersed southward on and near the Korean peninsula, though its specific origin remains unclear. Interestingly, the Chinese
E. stellata
population SCP suggests that the Chinese population might be most ancient among all the four
Eranthis
species.
E. pungdoensis
may have allopatrically speciated from
E. byunsanensis
during the Holocene. The Korean peninsula and the surrounding areas can be considered interesting regions which provide the opportunity to observe both northern‐ and southern‐sourced
Eranthis
species.