IntroductionTelomeres are specialized DNA-protein complexes that cap the termini of linear chromosomes. They compensate for incomplete DNA replication and contribute to the stability of chromosomes and karyotype (Muller, 1932;Pardue and Debaryshe, 1999;Biessmann and Mason, 2003). Telomeres also participate in nuclear architecture maintenance, and are known to associate with nuclear lamina (Hochstrasser et al., 1986;Marshall et al., 1996;Hari et al., 2001) or with nuclear matrix (de Lange, 1992;Luderus et al., 1996). However, the factors that underlie these phenomena, as well as the mechanisms of telomere functioning, remain poorly understood in Drosophila melanogaster.In eukaryotes, such as budding yeast, fission yeast and humans, telomeres are considered to be essentially heterochromatic (Perrod and Gasser, 2003). Heterochromatin is characterized by a high degree of DNA compaction, late replication in S phase, and by association with specific silencing proteins (Richards and Elgin, 2002). Intercalary (IH) and pericentric heterochromatin regions in many Diptera species are characterized by DNA underreplication and nonhomologous (ectopic) pairing of chromosomal regions in polytene chromosomes (Zhimulev, 1998). The question whether D. melanogaster telomeres are heterochromatic in