This paper designs a biophotonic sensor that utilizes the localized surface plasmon resonance (LSPR) effect to detect Shigella sonnei (S. sonnei) with high sensitivity, featuring a novel crayfish-type optical fiber structure. Diseases and food safety caused by S. sonnei have become a public health issue of common concern around the world. This sensor is specifically designed for the detection of S. sonnei. This sensor has the advantage of being easy to operate, requires no labeling, and has high specificity. Excite the LSPR effect using gold nanoparticles (AuNPs). To enhance the LSPR effect, a fusion structure of multimode fiber and seven-core fiber was utilized, as was a crayfish-type optical fiber structure. Using Rsoft to simulate the crayfish-type optical fiber structure, it is concluded that the structure has excellent evanescent field. S. sonnei antibodies were used to improve the specificity of the sensor. Tungsten disulfide thin layer (WS2-thin layer) and zinc oxide nanowires were used to increase the surface area for antibody attachment. The linear range of the sensor was 1 × 100–1 × 107 CFU/ml, the sensitivity was 0.378 nm/lg (CFU/ml), and the limit of detection was 4.78 CFU/ml. The reproducibility, reusability, selectivity, and stability of the sensor were tested. The test results showed that the sensor had excellent performance. In addition, the sensor was tested with real food samples. This research has far-reaching significance for biophotonic sensors and human health.