Integrating surface and groundwater use is a crucial part of water management. When one type of water is depleted, the other follows suit because of the constant movement and interaction between them. Therefore, the primary objective of this research is to establish a method by which the water evaluation and planning system (WEAP) surface water model and the MODFLOW groundwater model can communicate with one another. This article aims to demonstrate the interdependence of groundwater and surface water. Here, we use MODFLOW to model the saturated soil region and the soil moisture method to model the unsaturated soil region. The interaction between surface water and groundwater will affect the region's water resources and how they will operate under the continuance of existing practices. The simulation of saturated and unsaturated soil zones using a connected model of surface and groundwater employing all the hydroclimatology balance components is one of the most significant accomplishments of this research. The findings show that the (Iran) Sonqor Plain's maximum aquifer recharge throughout the months of November to May during a period of 30 years (October 1991 to September 2020) ranges between 1.5 and 2.6 million m³. A lack of recharge from irrigation water infiltration occurs in some of these months in addition to rain. The highest rate of groundwater level increase in this area is 4.5 m yr⁻¹ as a result of the distribution of irrigation water provided from the dam in the north‐western region.