To better understand how flooding and tree fall structure forests in the Amazon, I sampled vegetation plots within three blackwater forests (least flooded, medium flooded, highest flooded) and their tree fall gaps in the Peruvian Amazon. I found (1) increased flooding decreased family richness in the closed-canopy forests but increased it in their gaps, with no trends for no. of unique species, (2) flooding decreased stem size everywhere as did the number of stems as size increased especially for larger stems, (3) Green's index showed clumping only for least-flooded forests with the closedcanopy forest showing more than its tree fall gap, and (4) both flooding and tree fall gap creation decreased canopy coverage perhaps as an additive effect. Further among the stem size classes, only the smallest stems were significantly affected by openness and by type of forest, with a significant interaction term where flooding significantly decreased the number of these smaller stems in all forests and their gaps, except those with the highest level of flooding. Also tree fall gaps had significantly more, smaller stems than their forests in the two most-flooded forests, but not in the least-flooded forest. I conclude that flooding is a greater stressor and influence on the structure of these forests than tree fall, and so, in these forests, gradients and disturbances overlap in their traditional roles.