Bacillus has been
widely studied for
its potential
to protect plants from pathogens. Here, we report the whole genome
sequence of Bacillus subtilis H2, which
was isolated from the tea garden soil of Guiyang Forest Park. Strain
H2 showed a broad spectrum of antagonistic activities against many
plant fungal pathogens and bacteria pathogens, including the rice
blast fungus Magnaporthe oryzae, and
showed a good field control effect against rice blast. The complete
genome of B. subtilis H2 contained
a 4,160,635-bp circular chromosome, with an average G + C content
of 43.78%. Through the genome mining of strain H2, we identified 7
known antimicrobial compound biosynthetic gene clusters (BGCs) including
sporulation killing factor, surfactin, bacillaene, fengycin, bacillibactin,
subtilosin A, and bacilysin. Palmitic acid (PA), a secondary metabolite,
was detected and identified in the H2 strain through genome mining
analysis and gas chromatography–mass spectrometry (GC-MS).
Additionally, we propose, for the first time, that the type II fatty
acid synthesis (FAS) pathway in Bacillus is responsible
for PA biosynthesis. This finding was confirmed by studying the antimicrobial
activity of PA and conducting reverse transcription–quantitative
polymerase chain reaction (RT-qPCR) experiments. We also identified
numerous genes associated with plant–bacteria interactions
in the H2 genome, including more than 94 colonization-related genes,
more than 34 antimicrobial genes, and more than 13 plant growth-promoting
genes. These findings contribute to our understanding of the biocontrol
mechanisms of B. subtilis H2 and have
potential applications in crop disease control.