This study investigates the relationship between clay minerals (kaolinite and illite) and rock properties of the claystone, including both mechanical (cohesion, friction angle, stress, and strain) and physical properties (natural water content, void ratio, and wet density), belonging to Warukin Formation of Kalimantan, Indonesia. Mineralogical characteristics of these rocks were studied using petrological and X-ray diffraction techniques, whereas the mechanical and physical properties were tested by conducting uniaxial and triaxial tests. Relationship among the variables was determined using correlation coefficients. It was observed that the mineralogy of the rocks pose strong constraints on their engineering properties. The results showed that an increase in illite content decreases cohesion, friction angle, strength, and safety factor; and increases natural moisture content, void ratio, and wet density. Although illite content of these rocks was just about 10.8% of the total minerals, it has significantly contributed to the modification of physical and mechanical properties. In contrast, kaolinite did not have a significant impact; since the correlation between various parameters was significantly low (correlation coefficient was much less, <0.3). Therefore while selecting the materials for geotechnical engineering applications, illite emerges as a safer alternative to kaolinite, especially when its concentration is less than 10.8% of the total rock mass.