Hybridization or the crossing of individuals from the same species (crossbreeding) or different species (interspecific) offers the possibility of improving traits that benefit aquaculture. Hybridization in salmonids has been used to improve disease resistance, growth rates, manipulate sex ratios and to produce sterile fish (Bartley et al., 2000). For example, Salmo trutta x Salvelinus fontinalis hybrids are sterile (Scheerer & Thorgaard, 1983). The hybrids of Salvelinus namaycush x S. fontinalis (maintained at low pH, 5.5-7.2) and Salmo labrax x Oncorhynchus mykiss have increased growth rates relative to the parental species by day 200 post-hatch (Akhan et al., 2011), while O. mykiss x Salvelinus sp. and S. trutta x S. salar hybrids have increased disease resistance (Maynard et al., 2016). Despite the potential advantages of the salmonid hybrids, their exploitation for aquaculture is uncommon due to high mortality during embryonic stages and up until external feeding (Bartley et al., 2000). Nonetheless, there are some reports that triploidization can increase the viability of salmonid hybrids (Blanc & Maunas, 2005; Blanc et al., 2000; Scheerer & Thorgaard, 1983). One potential reason for high mortalities during the larval stage may be abnormalities in digestive tract function and for this reason characterization of gastrointestinal tract development and the nutritional physiology of fish larvae can contribute to overcome such problems (Rønnestad et al., 2013). Caspian brown trout, CBT, Salmo trutta caspius is one of the native cold water species with high potential for aquaculture in the