The article is devoted to institutional features of agricultural technoparks as a new form of scientific and industrial cooperation in agriculture, possessing system interrelation with steady development of rural territories, export of agricultural production and possibilities of a conclusion of a domestic agrarian science on world level of researches. Long-term crisis manifestations in Russian agriculture in recent years have only been purchased quantitatively, mainly due to the winning conjuncture of export markets, but not overcome qualitatively, which retains its main disproportions and related risks. The given crisis phenomena are considered in article as system which subsystems are agrarian science, state support of agricultural commodity producers, development and financing of rural territories. These three interrelated and interdependent problems, on the one hand, presented by the crisis of overproduction of budget-funded scientific research in agriculture, and by the crisis of profitability of agricultural production, on the other hand, by the crisis of budget financing of rural areas, can be comprehensively solved through the creation of agricultural technology parks as a means and mechanism for the development of continuous scientific and production cooperation in agriculture and its digital transformation.