Previous studies from our laboratory and others have suggested that increased expression of cox-2 is important in the genesis of esophageal adenocarcinoma. In vitro studies suggest that cox-2 regulates expression of the anti-apoptotic protein bcl-2, thus possibly accounting for reduced apoptosis in carcinogenesis. The aim of this study was to investigate the relationship of these 2 genes in the development of Barrett's-associated adenocarcinoma. Histologic sections from endoscopic biopsies or esophagectomy specimens were classified as non-dysplastic Barrett's (n 5 30), intraepithelial neoplasia (n 5 12) and adenocarcinoma (n 5 48). The desired tissue was isolated by laser capture microdissection and expression levels of cox-2 and bcl-2 were measured by quantitative real-time PCR (Taqman 1 ). Gene expression levels were compared to samples of the distal esophageal squamous epithelium (n 5 55) and reflux-esophagitis (n 5 25), without Barrett's or cancer. Expression of both bcl-2 and cox-2 were increased in non-dysplastic Barrett's (p 5 0.0077, p 5 0.0037), intraepithelial neoplasia (p 5 0.0053, p 5 0.0220) and adenocarcinoma (p < 0.0001, p < 0.0001) compared to squamous epithelium or reflux-esophagitis. Furthermore, there is a significant correlation between these two genes, especially in carcinoma (p < 0.0001). ' 2006 Wiley-Liss, Inc.Key words: bcl-2; cox-2; carcinogenesis; esophageal adenocarcinoma; Barrett's esophagusThe incidence of esophageal adenocarcinoma is increasing in a dramatic rate and this previously uncommon tumor has recently surpassed squamous cell carcinoma to become the most common esophageal cancer in many Western countries. Adenocarcinoma develops in a multi-step progression starting from a precursor lesion, Barrett's esophagus, a condition in which the normal squamous epithelium of the distal esophagus is replaced with metaplastic specialized intestinal-type epithelium as a sequela of chronic gastroesophageal reflux disease. [1][2][3] We and others have previously shown that the progression from metaplasia to intraepithelial neoplasia (IN) to adenocarcinoma in esophageal cancer is accompanied by increasing expression of cox-2, 4-13 one of the rate-limiting enzymes in the conversion of arachidonic acid to prostaglandins. Cox-2 appears to affect a remarkable variety of processes relevant to tumor development, including stimulation of epithelial cell proliferation, 14,15 apoptosis, 16 angiogenesis, 17,18 cell invasiveness, 19 immune suppression 20 and production of mutagens. 21 There is particularly good evidence that cox-2 promotes anti-apoptotic signaling and that this plays an important role in carcinogenesis, even though questions remain regarding the specific molecular mechanism of the effect. Early studies suggested that the effects of cox-2 on apoptosis were mediated through the induction of the anti-apoptotic molecule bcl-2. Tsujii and Dubois 22 showed that forced expression of cox-2 in cox-2-negative cells caused elevated levels of bcl-2, an effect that was reversed by a cox-2 inhibito...