Backgroud: This study was aimed to develop and internally validate an ISUP (International Society of Urology Pathology) upgrade risk nomogram from the biopsy tissue to the specimen of radical prostatectomy. Methods: The clinical characteristics of 166 patients with prostate cancer were retrospectively analyzed, who were divided into two groups based on the upgrade of ISUP between the biopsy tissue and radical prostatectomy specimen. Logistic regression analysis was used to predict the significant independent factors of ISUP upgrade, a nomogram was established to predict ISUP upgrade of prostatectomy specimen based on the significant factors. The C-index, calibration plot, and decision curve analysis were used to assess the discrimination, calibration, and clinical usefulness of the predicting model. Internal validation was evaluated by using the bootstrapping validation. Results: There were 47 patients in the ISUP upgrade group and 119 patients in the no ISUP upgrade group respectively. Patients in the ISUP upgrade group inclined to be younger age, smaller PV, lower GS scores and PB-ISUP than the no ISUP upgrade group (p=0.043, p=0.041, p < 0.001, p =0.04, respectively), Multivariate logistic regression analysis showed that PSA≥20 ng/ml (OR=8.558, P=0.024), Gleason score of PCa≤6 (OR=9.026, P=0.004), PB-ISUP=3,4vs5 (OR=23.232, P=0.000417; OR=26.72, P=0.000241), ways of prostate biopsy (TP-SB+COG-TB (transperineal prostate biopsy + cognitive fusion targeted biopsy) VS TR-SB (transrectal prostate system biopsy), OR=033, P=0.036) and number of positive cores < 10 (OR=0.21, P=0.002) were the independent risk factors for ISUP upgrade. A prediction nomogram model of ISUP upgrade was built based on these significant factors above, the area under the receiver operating characteristic (AUC) curve of which was 0.843. The C-index for the prediction nomogram was 0.871 (95% CI: 0.817–0.925) and the nomogram showed good calibration. Decision curve analysis also demonstrated that the threshold value of RP-ISUP upgrade risk was 1% to 89%. Conclusion: A novel nomogram incorporating PSA, Gleason score of PCa, PB-ISUP, ways of prostate biopsy and number of positive cores was built with a relatively good accuracy to assist clinicians to evaluate the risk of ISUP upgrade in the radical prostatectomy specimen, especially for the low-risk prostate cancer diagnosed by TR-SB.